Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c5/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c5
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c5_mean_counts_contribs float

liu2026Multiomics_Heart_c5_mean_counts_contribs
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
 HISTOGRAM FOR liu2026Multiomics_Heart_c5_mean_counts_contribs [-0.103, 0.275]
n
319,160,982
mean
0.000428
sd
0.00467

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3191609829.94% 317617971
chr1 29864232 12.00% 29720208
chr2 26828389 11.08% 26699481
chr3 21851468 11.02% 21745662
chr4 17224917 9.06% 17140112
chr5 18958232 10.44% 18866452
chr6 19648776 11.50% 19553527
chr7 16925705 10.62% 16842972
chr8 15038896 10.36% 14966020
chr9 13198179 9.54% 13134127
chr10 16016161 11.97% 15939936
chr11 16242448 12.02% 16164421
chr12 15294369 11.48% 15220488
chr13 9314120 8.14% 9268502
chr14 9331552 8.72% 9286265
chr15 10639045 10.43% 10588091
chr16 9364123 10.37% 9319622
chr17 12077884 14.51% 12019891
chr18 7791532 9.69% 7753618
chr19 8540581 14.57% 8499726
chr20 7746240 12.02% 7708889
chr21 3448636 7.38% 3431259
chr22 5759384 11.33% 5732360
chrX 7985792 5.12% 7946329
chrY 70321 0.12% 70013
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 317617971 1 849 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c5__mean_counts_contribs.bw 1.92 GB 991c45f33c006afb86dd7db5a078ffd3
genomic_resource.yaml 1.31 KB 214e27e2dcf6b3c8489cd6ca74b0f51d
statistics/