Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c6/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c6
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c6_mean_counts_contribs float

liu2026Multiomics_Heart_c6_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Heart_c6_mean_counts_contribs [-0.0486, 0.169]
n
179,293,077
mean
0.000216
sd
0.00318

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1792930775.59% 177918308
chr1 17336830 6.96% 17205457
chr2 14683895 6.06% 14568540
chr3 11471140 5.78% 11379326
chr4 8352072 4.39% 8282998
chr5 9528975 5.25% 9454064
chr6 10698887 6.26% 10615221
chr7 9122317 5.72% 9051302
chr8 8051081 5.55% 7988032
chr9 7907814 5.71% 7847875
chr10 8953827 6.69% 8884038
chr11 9654581 7.15% 9582608
chr12 8818950 6.62% 8750802
chr13 4353649 3.81% 4318558
chr14 5548231 5.18% 5506145
chr15 5908047 5.79% 5862945
chr16 6081407 6.73% 6037513
chr17 8141018 9.78% 8083124
chr18 3780591 4.70% 3749385
chr19 6787740 11.58% 6742222
chr20 4896765 7.60% 4860914
chr21 2177080 4.66% 2159434
chr22 3695444 7.27% 3669428
chrX 3252396 2.08% 3228662
chrY 90340 0.16% 89715
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 177918308 1 1006 1.01 1
global segment-length histogram

Files

Filename Size md5
Heart_c6__mean_counts_contribs.bw 1.08 GB 7094b0d38af0dfc1631c3c7864d523d1
genomic_resource.yaml 1.31 KB 35f027116e47fd7dd7be8f77a53ca3c7
statistics/