Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c7/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c7
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c7_mean_counts_contribs float

liu2026Multiomics_Heart_c7_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Heart_c7_mean_counts_contribs [-0.0984, 0.272]
n
239,029,448
mean
0.000434
sd
0.00493

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2390294487.45% 237901983
chr1 22977726 9.23% 22868895
chr2 19654043 8.12% 19561205
chr3 16383977 8.26% 16306903
chr4 12681300 6.67% 12620206
chr5 13983849 7.70% 13917601
chr6 14565751 8.53% 14496442
chr7 12566426 7.89% 12505983
chr8 11026560 7.60% 10974509
chr9 9849433 7.12% 9803148
chr10 11855783 8.86% 11800837
chr11 12192638 9.03% 12135954
chr12 11320207 8.49% 11266550
chr13 6676040 5.84% 6643840
chr14 6977185 6.52% 6944726
chr15 8225971 8.07% 8187436
chr16 7138657 7.90% 7105694
chr17 9454007 11.36% 9409982
chr18 5674902 7.06% 5647704
chr19 7155574 12.21% 7122792
chr20 5708419 8.86% 5681932
chr21 2419799 5.18% 2407782
chr22 4480363 8.82% 4460344
chrX 6044794 3.87% 6015561
chrY 16044 0.03% 15957
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 237901983 1 853 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c7__mean_counts_contribs.bw 1.44 GB d604daf08a9cace25db4c4ab269f9bac
genomic_resource.yaml 1.31 KB dff92bf67cdb77791352f76329ca9bbc
statistics/