Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c7/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Heart for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c7
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c7_mean_pred_corrected float

liu2026Multiomics_Heart_c7_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Heart_c7_mean_pred_corrected [0.00022, 36.8]
n
129,117,271
mean
0.306
sd
0.709

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1291172714.02% 129117183
chr1 12443220 5.00% 12443208
chr2 10561823 4.36% 10561823
chr3 8827909 4.45% 8827903
chr4 6809115 3.58% 6809113
chr5 7538552 4.15% 7538548
chr6 7889147 4.62% 7889145
chr7 6752619 4.24% 6752617
chr8 5916296 4.08% 5916293
chr9 5315995 3.84% 5315986
chr10 6416494 4.80% 6416488
chr11 6601216 4.89% 6601213
chr12 6129449 4.60% 6129443
chr13 3576087 3.13% 3576084
chr14 3788556 3.54% 3788553
chr15 4451577 4.36% 4451569
chr16 3854845 4.27% 3854843
chr17 5196543 6.24% 5196538
chr18 3041346 3.78% 3041345
chr19 3955691 6.75% 3955687
chr20 3067024 4.76% 3067020
chr21 1300411 2.78% 1300410
chr22 2431180 4.78% 2431179
chrX 3244176 2.08% 3244175
chrY 8000 0.01% 8000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 129117183 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c7__mean_pred_corrected.bw 982.48 MB b9e8befd24a1f64c9a2b5f395f1a6f91
genomic_resource.yaml 1.27 KB 3943fd3f7684e3694697319ed74108b3
statistics/