Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c8/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c8
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c8
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c8_mean_counts_contribs float

liu2026Multiomics_Heart_c8_mean_counts_contribs
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
 HISTOGRAM FOR liu2026Multiomics_Heart_c8_mean_counts_contribs [-0.0944, 0.255]
n
250,509,595
mean
0.000407
sd
0.00485

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2505095957.81% 249286698
chr1 23935671 9.61% 23819397
chr2 20614543 8.51% 20514101
chr3 17078501 8.61% 16995277
chr4 13205692 6.94% 13139924
chr5 14632454 8.06% 14561570
chr6 15117106 8.85% 15043191
chr7 13148437 8.25% 13082552
chr8 11596408 7.99% 11540117
chr9 10360278 7.49% 10308808
chr10 12429488 9.29% 12369743
chr11 12821096 9.49% 12759121
chr12 11914297 8.94% 11855921
chr13 7015404 6.13% 6980657
chr14 7346224 6.86% 7310636
chr15 8581606 8.41% 8539679
chr16 7555043 8.36% 7518333
chr17 9860455 11.84% 9812744
chr18 6027165 7.50% 5997786
chr19 7538012 12.86% 7501256
chr20 6003046 9.32% 5974183
chr21 2595321 5.56% 2582316
chr22 4723129 9.29% 4700816
chrX 6312058 4.05% 6280916
chrY 98161 0.17% 97654
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 249286698 1 904 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c8__mean_counts_contribs.bw 1.51 GB 19698044f02656db36ca7ad2a964ab3b
genomic_resource.yaml 1.31 KB e4cf9e6ff5d2c63ab238efc7317a3b3e
statistics/