Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c9/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Heart for cell cluster c9
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c9
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c9_mean_counts_contribs float

liu2026Multiomics_Heart_c9_mean_counts_contribs
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
 HISTOGRAM FOR liu2026Multiomics_Heart_c9_mean_counts_contribs [-0.112, 0.203]
n
219,980,550
mean
0.000425
sd
0.00451

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2199805506.85% 218632760
chr1 20487321 8.23% 20362270
chr2 18198854 7.51% 18087483
chr3 14454806 7.29% 14365328
chr4 10704934 5.63% 10636963
chr5 12658422 6.97% 12580279
chr6 13280130 7.77% 13198042
chr7 11354362 7.13% 11283619
chr8 10386826 7.16% 10322476
chr9 9102364 6.58% 9046861
chr10 11545431 8.63% 11474631
chr11 11633400 8.61% 11563545
chr12 10710412 8.04% 10644934
chr13 6135681 5.37% 6097041
chr14 6254432 5.84% 6216129
chr15 7541393 7.39% 7495337
chr16 7004072 7.75% 6962694
chr17 9041878 10.86% 8988104
chr18 5097279 6.34% 5065581
chr19 6861143 11.70% 6820786
chr20 5656152 8.78% 5622070
chr21 2318756 4.96% 2304098
chr22 4200501 8.27% 4175956
chrX 5309235 3.40% 5276043
chrY 42766 0.07% 42490
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 218632760 1 847 1.01 1
global segment-length histogram

Files

Filename Size md5
Heart_c9__mean_counts_contribs.bw 1.32 GB d38d2894b054ca523b2afc4bf19a227c
genomic_resource.yaml 1.31 KB 21032545902614bea9323a0e6db0648f
statistics/