Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Heart/c9/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Heart for cell cluster c9
Description
Labels
  • assay: SHARE-seq
  • cluster: Heart_c9
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Heart
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Heart_c9_mean_pred_corrected float

liu2026Multiomics_Heart_c9_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Heart_c9_mean_pred_corrected [0.000338, 24.7]
n
116,978,506
mean
0.177
sd
0.398

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1169785063.65% 116978446
chr1 10925893 4.39% 10925891
chr2 9645662 3.98% 9645654
chr3 7645766 3.86% 7645762
chr4 5652056 2.97% 5652054
chr5 6695629 3.69% 6695623
chr6 7076063 4.14% 7076058
chr7 6005335 3.77% 6005329
chr8 5497157 3.79% 5497155
chr9 4842789 3.50% 4842788
chr10 6141443 4.59% 6141441
chr11 6211740 4.60% 6211739
chr12 5715223 4.29% 5715218
chr13 3235672 2.83% 3235669
chr14 3336536 3.12% 3336535
chr15 4014794 3.94% 4014790
chr16 3736387 4.14% 3736386
chr17 4887636 5.87% 4887636
chr18 2680142 3.33% 2680141
chr19 3735786 6.37% 3735786
chr20 2991579 4.64% 2991577
chr21 1235965 2.65% 1235964
chr22 2232094 4.39% 2232093
chrX 2813723 1.80% 2813721
chrY 23436 0.04% 23436
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 116978446 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Heart_c9__mean_pred_corrected.bw 888.49 MB 355cfda1d4c0da3962d2bdd5c0eab14b
genomic_resource.yaml 1.27 KB 25caf5e869abf8ebedabaa31a66ffc8f
statistics/