Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c0/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Liver for cell cluster c0 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Liver_c0_mean_counts_contribs | float |
liu2026Multiomics_Liver_c0_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.119, 0.577] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 189615518 | 5.91% | 188654386 |
| chr1 | 19032643 | 7.64% | 18936072 |
| chr2 | 14659427 | 6.05% | 14584793 |
| chr3 | 12367137 | 6.24% | 12303550 |
| chr4 | 8054273 | 4.23% | 8010749 |
| chr5 | 9756454 | 5.37% | 9707111 |
| chr6 | 11355716 | 6.65% | 11298304 |
| chr7 | 9937985 | 6.24% | 9887631 |
| chr8 | 8020042 | 5.53% | 7979172 |
| chr9 | 8062583 | 5.83% | 8022417 |
| chr10 | 8564079 | 6.40% | 8519620 |
| chr11 | 9629270 | 7.13% | 9582315 |
| chr12 | 9390880 | 7.05% | 9344374 |
| chr13 | 4362880 | 3.81% | 4340318 |
| chr14 | 6186719 | 5.78% | 6155553 |
| chr15 | 6032002 | 5.91% | 6000896 |
| chr16 | 6754276 | 7.48% | 6722339 |
| chr17 | 8925698 | 10.72% | 8880537 |
| chr18 | 3802849 | 4.73% | 3781799 |
| chr19 | 7907649 | 13.49% | 7872155 |
| chr20 | 5020438 | 7.79% | 4995921 |
| chr21 | 2095384 | 4.49% | 2082191 |
| chr22 | 4458783 | 8.77% | 4437686 |
| chrX | 5011081 | 3.21% | 4985354 |
| chrY | 227270 | 0.40% | 223529 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 188654386 | 1 | 2538 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Liver_c0__mean_counts_contribs.bw | 1.14 GB | 4d1b04295e474d56ef3a94272756ec61 |
| genomic_resource.yaml | 1.31 KB | e766ea4056468e167754400df00693e2 |
| statistics/ |
