Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c0/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Liver for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c0
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c0_obs_pval_signal float

liu2026Multiomics_Liver_c0_obs_pval_signal
Macs2 p-value signal track for observed accessibility
 HISTOGRAM FOR liu2026Multiomics_Liver_c0_obs_pval_signal [0, 9.92e+03]
n
3,087,300,917
mean
1.58
sd
37.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308730091796.20% 113324275
chr1 248946474 >99.99% 10406810
chr2 242183502 >99.99% 9258530
chr3 198232677 99.97% 7713296
chr4 190204554 99.99% 6078991
chr5 181477713 99.97% 6325979
chr6 170742257 99.96% 6724269
chr7 159335910 99.99% 6165025
chr8 145076081 99.96% 5165940
chr9 138318311 99.94% 4773092
chr10 133787439 99.99% 5058442
chr11 135076642 99.99% 5727855
chr12 133265010 99.99% 5508158
chr13 114354207 99.99% 3010792
chr14 106883748 99.85% 3618734
chr15 101981162 99.99% 3198215
chr16 90226332 99.88% 3663699
chr17 83247391 99.99% 4569212
chr18 80263248 99.86% 2428273
chr19 58607600 99.98% 4062377
chr20 64334015 99.83% 2741781
chr21 46699972 99.98% 1310981
chr22 50808460 99.98% 2309884
chrX 156030846 99.99% 3373914
chrY 57217366 99.98% 130026
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 113324275 1 30002098 27.24 7
global segment-length histogram

Files

Filename Size md5
Liver_c0__obs_pval_signal.bw 645.61 MB 6424c173bbc0da8c08a2f719e84b69dc
genomic_resource.yaml 1.23 KB a2f9fd6f8f91ab09aa87f732e4793561
statistics/