Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c1/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Liver for cell cluster c1 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Liver_c1_mean_counts_contribs | float |
liu2026Multiomics_Liver_c1_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.125, 0.359] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 308395744 | 9.61% | 306799533 |
| chr1 | 29605014 | 11.89% | 29451932 |
| chr2 | 24721303 | 10.21% | 24594124 |
| chr3 | 20704743 | 10.44% | 20596498 |
| chr4 | 14121907 | 7.42% | 14045950 |
| chr5 | 16430964 | 9.05% | 16345846 |
| chr6 | 18255495 | 10.69% | 18161653 |
| chr7 | 15828551 | 9.93% | 15747197 |
| chr8 | 13636900 | 9.40% | 13566729 |
| chr9 | 13056407 | 9.43% | 12989433 |
| chr10 | 15330395 | 11.46% | 15250392 |
| chr11 | 15272491 | 11.31% | 15194955 |
| chr12 | 15185878 | 11.39% | 15107863 |
| chr13 | 7756900 | 6.78% | 7716126 |
| chr14 | 10011763 | 9.35% | 9960924 |
| chr15 | 10050563 | 9.85% | 9998276 |
| chr16 | 10560584 | 11.69% | 10508280 |
| chr17 | 13060415 | 15.69% | 12993249 |
| chr18 | 7098557 | 8.83% | 7059322 |
| chr19 | 10278767 | 17.54% | 10228315 |
| chr20 | 8246960 | 12.80% | 8205502 |
| chr21 | 3478448 | 7.45% | 3458237 |
| chr22 | 6617538 | 13.02% | 6585556 |
| chrX | 8894158 | 5.70% | 8846438 |
| chrY | 191043 | 0.33% | 186736 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 306799533 | 1 | 2526 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Liver_c1__mean_counts_contribs.bw | 1.85 GB | 0416b93134ea610a044d9f20165409fa |
| genomic_resource.yaml | 1.31 KB | fb42831f10bebbd9dfe9e505d0a1a6c6 |
| statistics/ |
