Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c10/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Liver for cell cluster c10 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Liver_c10_mean_counts_contribs | float |
liu2026Multiomics_Liver_c10_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0514, 0.258] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 178545798 | 5.56% | 177251806 |
| chr1 | 17628451 | 7.08% | 17499619 |
| chr2 | 13926439 | 5.75% | 13824668 |
| chr3 | 11481523 | 5.79% | 11396220 |
| chr4 | 7728813 | 4.06% | 7667864 |
| chr5 | 9404461 | 5.18% | 9334682 |
| chr6 | 10417029 | 6.10% | 10339990 |
| chr7 | 9017113 | 5.66% | 8950688 |
| chr8 | 7897376 | 5.44% | 7839318 |
| chr9 | 7514293 | 5.43% | 7461264 |
| chr10 | 8788957 | 6.57% | 8725317 |
| chr11 | 9199058 | 6.81% | 9134641 |
| chr12 | 8743600 | 6.56% | 8680665 |
| chr13 | 4186144 | 3.66% | 4154517 |
| chr14 | 5688505 | 5.31% | 5647847 |
| chr15 | 5808658 | 5.70% | 5766143 |
| chr16 | 6321518 | 7.00% | 6278752 |
| chr17 | 8481206 | 10.19% | 8423105 |
| chr18 | 3804541 | 4.73% | 3774568 |
| chr19 | 6983483 | 11.91% | 6938431 |
| chr20 | 4922320 | 7.64% | 4888234 |
| chr21 | 2071080 | 4.43% | 2056166 |
| chr22 | 4044432 | 7.96% | 4017646 |
| chrX | 4391978 | 2.81% | 4359437 |
| chrY | 94820 | 0.17% | 92024 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 177251806 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Liver_c10__mean_counts_contribs.bw | 1.07 GB | 927ec2d9b8d78fcdb6adff208901edd8 |
| genomic_resource.yaml | 1.31 KB | 423c8700fb17dabe5c0f4a9fa95f307f |
| statistics/ |
