Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c10/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Liver for cell cluster c10
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c10
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c10_mean_pred_corrected float

liu2026Multiomics_Liver_c10_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Liver_c10_mean_pred_corrected [0.00197, 22.1]
n
93,493,854
mean
0.147
sd
0.345

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 934938542.91% 93492894
chr1 9234896 3.71% 9234890
chr2 7280071 3.01% 7280067
chr3 5978879 3.02% 5978878
chr4 4004487 2.11% 4004487
chr5 4909561 2.70% 4909558
chr6 5452083 3.19% 5452081
chr7 4696200 2.95% 4696198
chr8 4108729 2.83% 4108727
chr9 3931260 2.84% 3931259
chr10 4593238 3.43% 4593235
chr11 4840999 3.58% 4840996
chr12 4589483 3.44% 4589481
chr13 2185677 1.91% 2185676
chr14 2987010 2.79% 2987007
chr15 3035120 2.98% 3035118
chr16 3312357 3.67% 3312355
chr17 4509952 5.42% 4509952
chr18 1973164 2.45% 1973163
chr19 3753831 6.40% 3753830
chr20 2568930 3.99% 2568930
chr21 1082056 2.32% 1082056
chr22 2116748 4.17% 2116748
chrX 2298429 1.47% 2298429
chrY 50694 0.09% 49773
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 93492894 1 910 1 1
global segment-length histogram

Files

Filename Size md5
Liver_c10__mean_pred_corrected.bw 710.17 MB 3f693632016255c618610a759833c945
genomic_resource.yaml 1.28 KB 251a7c70bf065375e64c6a4d0620d129
statistics/