Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c11/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Liver for cell cluster c11
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c11
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c11_mean_pred_corrected float

liu2026Multiomics_Liver_c11_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Liver_c11_mean_pred_corrected [0.000981, 13.3]
n
63,034,609
mean
0.0954
sd
0.209

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 630346091.96% 63034590
chr1 6262178 2.52% 6262175
chr2 4758853 1.96% 4758852
chr3 4017724 2.03% 4017722
chr4 2587591 1.36% 2587590
chr5 3089160 1.70% 3089160
chr6 3831367 2.24% 3831367
chr7 3143553 1.97% 3143553
chr8 2513373 1.73% 2513372
chr9 2695410 1.95% 2695410
chr10 2914723 2.18% 2914721
chr11 3259400 2.41% 3259399
chr12 3143499 2.36% 3143498
chr13 1352461 1.18% 1352459
chr14 2098768 1.96% 2098767
chr15 1980471 1.94% 1980471
chr16 2369872 2.62% 2369872
chr17 3214519 3.86% 3214518
chr18 1195010 1.49% 1195009
chr19 3047721 5.20% 3047720
chr20 1737105 2.70% 1737105
chr21 760919 1.63% 760918
chr22 1579253 3.11% 1579253
chrX 1444144 0.93% 1444144
chrY 37535 0.07% 37535
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 63034590 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Liver_c11__mean_pred_corrected.bw 478.69 MB 18e6719ccd4c670a24234b7d37f15ef8
genomic_resource.yaml 1.28 KB a0683e7af351bb20b1c0435e565c7e0a
statistics/