Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c12/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Liver for cell cluster c12 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Liver_c12_mean_counts_contribs | float |
liu2026Multiomics_Liver_c12_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0729, 0.336] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 144247224 | 4.49% | 143149401 |
| chr1 | 14292733 | 5.74% | 14183421 |
| chr2 | 11210454 | 4.63% | 11123335 |
| chr3 | 9577243 | 4.83% | 9501743 |
| chr4 | 6256435 | 3.29% | 6203740 |
| chr5 | 7252621 | 4.00% | 7196028 |
| chr6 | 8565260 | 5.01% | 8498928 |
| chr7 | 7536659 | 4.73% | 7478479 |
| chr8 | 6117701 | 4.22% | 6070126 |
| chr9 | 5968177 | 4.31% | 5923577 |
| chr10 | 6737655 | 5.04% | 6686110 |
| chr11 | 7596413 | 5.62% | 7540956 |
| chr12 | 7055916 | 5.29% | 7002430 |
| chr13 | 3481892 | 3.04% | 3454296 |
| chr14 | 4670871 | 4.36% | 4635524 |
| chr15 | 4677028 | 4.59% | 4641034 |
| chr16 | 5053293 | 5.59% | 5017740 |
| chr17 | 6697913 | 8.04% | 6650199 |
| chr18 | 2995602 | 3.73% | 2971083 |
| chr19 | 6035201 | 10.30% | 5994749 |
| chr20 | 3851495 | 5.98% | 3823241 |
| chr21 | 1532572 | 3.28% | 1520921 |
| chr22 | 3212912 | 6.32% | 3189990 |
| chrX | 3790644 | 2.43% | 3761835 |
| chrY | 80534 | 0.14% | 79916 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 143149401 | 1 | 988 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Liver_c12__mean_counts_contribs.bw | 886.34 MB | ffb4f48536bc3828fa80aeadb837e9d2 |
| genomic_resource.yaml | 1.31 KB | dc7bccf68846a492f25a193ea3d37777 |
| statistics/ |
