Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c13/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Liver for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c13
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c13_obs_pval_signal float

liu2026Multiomics_Liver_c13_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Liver_c13_obs_pval_signal [0, 399]
n
3,087,172,478
mean
0.494
sd
2.03

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308717247896.19% 18359529
chr1 248946456 >99.99% 1896130
chr2 242183500 >99.99% 1318777
chr3 198220519 99.96% 1162359
chr4 190179634 99.98% 714741
chr5 181477712 99.97% 864358
chr6 170739948 99.96% 1018022
chr7 159335879 99.99% 872324
chr8 145075555 99.96% 731643
chr9 138233144 99.88% 805070
chr10 133787441 99.99% 870176
chr11 135076611 99.99% 986440
chr12 133264736 99.99% 886954
chr13 114353950 99.99% 378799
chr14 106883506 99.85% 624297
chr15 101981143 99.99% 591952
chr16 90224426 99.87% 746991
chr17 83247264 99.99% 1004300
chr18 80263240 99.86% 345206
chr19 58607593 99.98% 1023587
chr20 64333686 99.83% 492209
chr21 46699965 99.98% 196109
chr22 50808358 99.98% 487982
chrX 156030846 99.99% 338256
chrY 57217366 99.98% 2847
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 18359529 1 30057092 168.15 10
global segment-length histogram

Files

Filename Size md5
Liver_c13__obs_pval_signal.bw 108.67 MB ea905d9955fea6cb35dae6fd6482eab9
genomic_resource.yaml 1.24 KB 7a065d3c68f7ee243e4e40d8a0612b18
statistics/