Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c2/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Liver for cell cluster c2 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Liver_c2_mean_counts_contribs | float |
liu2026Multiomics_Liver_c2_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.104, 0.572] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 149703057 | 4.66% | 148912454 |
| chr1 | 15289344 | 6.14% | 15208258 |
| chr2 | 11316839 | 4.67% | 11255826 |
| chr3 | 9648603 | 4.87% | 9596512 |
| chr4 | 6145568 | 3.23% | 6109707 |
| chr5 | 7441390 | 4.10% | 7401494 |
| chr6 | 8897400 | 5.21% | 8849784 |
| chr7 | 7604404 | 4.77% | 7564269 |
| chr8 | 6100297 | 4.20% | 6067466 |
| chr9 | 6408624 | 4.63% | 6375523 |
| chr10 | 6846951 | 5.12% | 6809233 |
| chr11 | 7834522 | 5.80% | 7794604 |
| chr12 | 7348368 | 5.51% | 7309812 |
| chr13 | 3279013 | 2.87% | 3260782 |
| chr14 | 4942951 | 4.62% | 4916405 |
| chr15 | 4844990 | 4.75% | 4818773 |
| chr16 | 5504902 | 6.09% | 5477743 |
| chr17 | 7310568 | 8.78% | 7273889 |
| chr18 | 2893409 | 3.60% | 2876114 |
| chr19 | 6673898 | 11.39% | 6643074 |
| chr20 | 4119733 | 6.39% | 4098857 |
| chr21 | 1599592 | 3.42% | 1591263 |
| chr22 | 3655903 | 7.19% | 3638518 |
| chrX | 3826965 | 2.45% | 3806667 |
| chrY | 168823 | 0.30% | 167881 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 148912454 | 1 | 1002 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Liver_c2__mean_counts_contribs.bw | 920.04 MB | 707d3d4c42565238f2f718c049bb22a6 |
| genomic_resource.yaml | 1.31 KB | f24202fa46e40896abf50f7f6462b3aa |
| statistics/ |
