Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c2/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Liver for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c2
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c2_obs_pval_signal float

liu2026Multiomics_Liver_c2_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Liver_c2_obs_pval_signal [0, 3.85e+03]
n
3,087,269,124
mean
0.793
sd
17.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308726912496.20% 49720875
chr1 248946474 >99.99% 4805149
chr2 242183500 >99.99% 3915180
chr3 198220338 99.96% 3330124
chr4 190204213 99.99% 2513499
chr5 181476094 99.97% 2710271
chr6 170743940 99.96% 2996515
chr7 159335893 99.99% 2638479
chr8 145075964 99.96% 2215207
chr9 138300487 99.93% 2088709
chr10 133787445 99.99% 2219330
chr11 135076638 99.99% 2602029
chr12 133264897 99.99% 2416621
chr13 114354206 99.99% 1216572
chr14 106883674 99.85% 1604770
chr15 101981155 99.99% 1416989
chr16 90225660 99.88% 1706977
chr17 83247391 99.99% 2113499
chr18 80263246 99.86% 970997
chr19 58607587 99.98% 1979690
chr20 64333701 99.83% 1218232
chr21 46699965 99.98% 526895
chr22 50808458 99.98% 1061024
chrX 156030839 99.99% 1406651
chrY 57217359 99.98% 47466
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 49720875 1 30001644 62.09 11
global segment-length histogram

Files

Filename Size md5
Liver_c2__obs_pval_signal.bw 290.93 MB 3b91e5ddf90c14cb10086e148aea751c
genomic_resource.yaml 1.23 KB c4ba29778d388e14be89c9d9a2bca26d
statistics/