Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c3/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Liver for cell cluster c3 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Liver_c3_mean_counts_contribs | float |
liu2026Multiomics_Liver_c3_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.144, 0.374] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 259620058 | 8.09% | 258283895 |
| chr1 | 25084313 | 10.08% | 24955539 |
| chr2 | 20671248 | 8.54% | 20564498 |
| chr3 | 17556487 | 8.85% | 17465494 |
| chr4 | 11914707 | 6.26% | 11850156 |
| chr5 | 13804762 | 7.60% | 13733544 |
| chr6 | 15458703 | 9.05% | 15379455 |
| chr7 | 13120176 | 8.23% | 13053137 |
| chr8 | 11502797 | 7.93% | 11443977 |
| chr9 | 11076238 | 8.00% | 11020872 |
| chr10 | 12626779 | 9.44% | 12560495 |
| chr11 | 12842969 | 9.51% | 12778901 |
| chr12 | 12700916 | 9.53% | 12635608 |
| chr13 | 6374588 | 5.57% | 6341159 |
| chr14 | 8397523 | 7.84% | 8354338 |
| chr15 | 8414473 | 8.25% | 8371376 |
| chr16 | 8943998 | 9.90% | 8900361 |
| chr17 | 10955411 | 13.16% | 10899479 |
| chr18 | 6071682 | 7.55% | 6038658 |
| chr19 | 8827670 | 15.06% | 8785293 |
| chr20 | 6924768 | 10.75% | 6890366 |
| chr21 | 2774765 | 5.94% | 2758897 |
| chr22 | 5592458 | 11.00% | 5566013 |
| chrX | 7537380 | 4.83% | 7497240 |
| chrY | 445247 | 0.78% | 439039 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 258283895 | 1 | 2511 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Liver_c3__mean_counts_contribs.bw | 1.56 GB | 3d8bf31b1226306634398b96ad55c4c9 |
| genomic_resource.yaml | 1.31 KB | 08bf1d7f3c3bc1e70b63c51635c237d6 |
| statistics/ |
