Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c4/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Liver for cell cluster c4 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Liver_c4_mean_counts_contribs | float |
liu2026Multiomics_Liver_c4_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.125, 0.294] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 223105112 | 6.95% | 221827092 |
| chr1 | 21748506 | 8.74% | 21623392 |
| chr2 | 17587308 | 7.26% | 17486035 |
| chr3 | 14869843 | 7.50% | 14784216 |
| chr4 | 10327055 | 5.43% | 10264231 |
| chr5 | 11985024 | 6.60% | 11915742 |
| chr6 | 13230762 | 7.75% | 13154968 |
| chr7 | 11404219 | 7.16% | 11339088 |
| chr8 | 9814825 | 6.76% | 9758037 |
| chr9 | 9404617 | 6.80% | 9350981 |
| chr10 | 11002107 | 8.22% | 10938866 |
| chr11 | 11139533 | 8.25% | 11077377 |
| chr12 | 10975922 | 8.24% | 10913107 |
| chr13 | 5549005 | 4.85% | 5516365 |
| chr14 | 7137846 | 6.67% | 7097586 |
| chr15 | 7204504 | 7.06% | 7163170 |
| chr16 | 7571947 | 8.38% | 7530611 |
| chr17 | 9357717 | 11.24% | 9305850 |
| chr18 | 5308895 | 6.61% | 5276360 |
| chr19 | 7559869 | 12.90% | 7519429 |
| chr20 | 6008187 | 9.32% | 5975417 |
| chr21 | 2334750 | 5.00% | 2320619 |
| chr22 | 4686739 | 9.22% | 4661683 |
| chrX | 6545188 | 4.19% | 6506671 |
| chrY | 350744 | 0.61% | 347291 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 221827092 | 1 | 1397 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Liver_c4__mean_counts_contribs.bw | 1.34 GB | a838f1946594f0637613144546d42b70 |
| genomic_resource.yaml | 1.31 KB | 53f745306038a6f23f2a9b1ef11bcddb |
| statistics/ |
