Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c4/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Liver for cell cluster c4
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c4
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c4_obs_pval_signal float

liu2026Multiomics_Liver_c4_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Liver_c4_obs_pval_signal [0, 945]
n
3,087,219,598
mean
0.515
sd
6.55

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308721959896.20% 49569032
chr1 248946468 >99.99% 4931838
chr2 242183500 >99.99% 3706480
chr3 198223350 99.96% 3254117
chr4 190203864 99.99% 2104842
chr5 181477743 99.97% 2452042
chr6 170741850 99.96% 2748311
chr7 159335945 99.99% 2446889
chr8 145075649 99.96% 2082799
chr9 138248171 99.89% 2212611
chr10 133787439 99.99% 2328990
chr11 135076621 99.99% 2581174
chr12 133265012 99.99% 2431021
chr13 114353941 99.99% 1122270
chr14 106883634 99.85% 1718805
chr15 101981119 99.99% 1600523
chr16 90227928 99.88% 1967804
chr17 83247265 99.99% 2451258
chr18 80263248 99.86% 1014518
chr19 58607600 99.98% 2264351
chr20 64332622 99.83% 1333285
chr21 46699959 99.98% 526218
chr22 50808458 99.98% 1261149
chrX 156030846 99.99% 984347
chrY 57217366 99.98% 43390
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 49569032 1 30002630 62.28 7
global segment-length histogram

Files

Filename Size md5
Liver_c4__obs_pval_signal.bw 299.63 MB 1c76c799fd0a8f3b8ffedef0ae61a7f6
genomic_resource.yaml 1.23 KB 86c939f68cdfc906f355ef0e274281bc
statistics/