Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c5/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Liver for cell cluster c5 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Liver_c5_mean_counts_contribs | float |
liu2026Multiomics_Liver_c5_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0803, 0.457] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 193303886 | 6.02% | 192324262 |
| chr1 | 19054135 | 7.65% | 18957512 |
| chr2 | 15393762 | 6.36% | 15315531 |
| chr3 | 12970283 | 6.54% | 12903501 |
| chr4 | 8575881 | 4.51% | 8529469 |
| chr5 | 10061859 | 5.54% | 10010741 |
| chr6 | 11700934 | 6.85% | 11641964 |
| chr7 | 10159586 | 6.38% | 10108143 |
| chr8 | 8371649 | 5.77% | 8329039 |
| chr9 | 8103763 | 5.86% | 8062011 |
| chr10 | 8737039 | 6.53% | 8692044 |
| chr11 | 9767764 | 7.23% | 9720346 |
| chr12 | 9615476 | 7.21% | 9567784 |
| chr13 | 4652020 | 4.07% | 4627531 |
| chr14 | 6280325 | 5.87% | 6249175 |
| chr15 | 5985603 | 5.87% | 5955084 |
| chr16 | 6543173 | 7.24% | 6512402 |
| chr17 | 8829074 | 10.60% | 8783888 |
| chr18 | 3975768 | 4.95% | 3953560 |
| chr19 | 7581452 | 12.93% | 7547454 |
| chr20 | 5075860 | 7.88% | 5051265 |
| chr21 | 2237442 | 4.79% | 2225232 |
| chr22 | 4123779 | 8.11% | 4104106 |
| chrX | 5314119 | 3.41% | 5286898 |
| chrY | 193140 | 0.34% | 189582 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 192324262 | 1 | 2587 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Liver_c5__mean_counts_contribs.bw | 1.16 GB | 5dc6a9519063adbf9d0d03d746a00124 |
| genomic_resource.yaml | 1.31 KB | a431e5320be5adc31017332cff00475c |
| statistics/ |
