Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c5/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Liver for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c5
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c5_mean_pred_corrected float

liu2026Multiomics_Liver_c5_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Liver_c5_mean_pred_corrected [0.00297, 34.6]
n
102,877,225
mean
0.261
sd
0.621

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1028772253.21% 102875749
chr1 10160872 4.08% 10160870
chr2 8160065 3.37% 8160061
chr3 6865875 3.46% 6865869
chr4 4529245 2.38% 4529241
chr5 5322447 2.93% 5322444
chr6 6214389 3.64% 6214387
chr7 5378086 3.38% 5378081
chr8 4412267 3.04% 4412264
chr9 4310467 3.11% 4310465
chr10 4654341 3.48% 4654339
chr11 5219577 3.86% 5219575
chr12 5125982 3.85% 5125981
chr13 2463852 2.15% 2463850
chr14 3341478 3.12% 3341476
chr15 3183507 3.12% 3183505
chr16 3496731 3.87% 3496729
chr17 4766438 5.72% 4766432
chr18 2096248 2.61% 2096247
chr19 4151148 7.08% 4151145
chr20 2703871 4.20% 2703868
chr21 1183339 2.53% 1183338
chr22 2207506 4.34% 2207504
chrX 2827955 1.81% 2827955
chrY 101539 0.18% 100123
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 102875749 1 1383 1 1
global segment-length histogram

Files

Filename Size md5
Liver_c5__mean_pred_corrected.bw 779.98 MB 085048c4fb387e0b8ddee67d17aabdb5
genomic_resource.yaml 1.27 KB b0cd18627f66d9978a5a55b3a8407c85
statistics/