Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c5/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Liver for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c5
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c5_obs_pval_signal float

liu2026Multiomics_Liver_c5_obs_pval_signal
Macs2 p-value signal track for observed accessibility
 HISTOGRAM FOR liu2026Multiomics_Liver_c5_obs_pval_signal [0, 2.21e+03]
n
3,087,216,017
mean
0.486
sd
6.08

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308721601796.20% 55420516
chr1 248946456 >99.99% 5376299
chr2 242183502 >99.99% 4326211
chr3 198232682 99.97% 3634567
chr4 190204538 99.99% 2396207
chr5 181477753 99.97% 2809361
chr6 170741899 99.96% 3200784
chr7 159335945 99.99% 2894389
chr8 145076020 99.96% 2306672
chr9 138233160 99.88% 2359785
chr10 133787439 99.99% 2460348
chr11 135076554 99.99% 2848641
chr12 133264748 99.99% 2762089
chr13 114354066 99.99% 1296883
chr14 106883698 99.85% 1855102
chr15 101981155 99.99% 1688622
chr16 90227918 99.88% 2056054
chr17 83247348 99.99% 2718251
chr18 80263248 99.86% 1070479
chr19 58607601 99.98% 2608262
chr20 64333667 99.83% 1499335
chr21 46699971 99.98% 654069
chr22 50808458 99.98% 1319615
chrX 156030832 99.99% 1246409
chrY 57217359 99.98% 32082
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 55420516 1 30013440 55.71 8
global segment-length histogram

Files

Filename Size md5
Liver_c5__obs_pval_signal.bw 329.96 MB b2f8ebd6d391f1bacfb3efea2bc1aba2
genomic_resource.yaml 1.23 KB 2a89c96af60000c9c81891ffd96d2bee
statistics/