Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c6/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Liver for cell cluster c6 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Liver_c6_mean_counts_contribs | float |
liu2026Multiomics_Liver_c6_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0973, 0.45] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 205879665 | 6.42% | 204819245 |
| chr1 | 20371398 | 8.18% | 20266360 |
| chr2 | 16029624 | 6.62% | 15947242 |
| chr3 | 13684599 | 6.90% | 13613151 |
| chr4 | 9136328 | 4.80% | 9085712 |
| chr5 | 10697350 | 5.89% | 10642326 |
| chr6 | 12156045 | 7.12% | 12093147 |
| chr7 | 10526527 | 6.61% | 10472048 |
| chr8 | 8920785 | 6.15% | 8874525 |
| chr9 | 8794641 | 6.35% | 8749656 |
| chr10 | 9898360 | 7.40% | 9846346 |
| chr11 | 10313586 | 7.63% | 10263144 |
| chr12 | 10155436 | 7.62% | 10103333 |
| chr13 | 4890428 | 4.28% | 4864558 |
| chr14 | 6736291 | 6.29% | 6702038 |
| chr15 | 6645751 | 6.52% | 6611313 |
| chr16 | 7190434 | 7.96% | 7155405 |
| chr17 | 9178131 | 11.02% | 9132432 |
| chr18 | 4609664 | 5.74% | 4584167 |
| chr19 | 7633741 | 13.02% | 7597757 |
| chr20 | 5552964 | 8.62% | 5525557 |
| chr21 | 2160332 | 4.62% | 2148581 |
| chr22 | 4576197 | 9.00% | 4554757 |
| chrX | 5838274 | 3.74% | 5807199 |
| chrY | 182779 | 0.32% | 178491 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 204819245 | 1 | 2525 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Liver_c6__mean_counts_contribs.bw | 1.24 GB | bfeeb227eaddcd3c6cb81bb9f88537ca |
| genomic_resource.yaml | 1.31 KB | 306b288182bfedab19489e03ce986500 |
| statistics/ |
