Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c6/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Liver for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c6
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c6_mean_pred_corrected float

liu2026Multiomics_Liver_c6_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Liver_c6_mean_pred_corrected [0.00256, 64.9]
n
109,835,182
mean
0.348
sd
1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1098351823.42% 109833747
chr1 10921320 4.39% 10921312
chr2 8533663 3.52% 8533659
chr3 7277432 3.67% 7277429
chr4 4833166 2.54% 4833163
chr5 5686350 3.13% 5686347
chr6 6489503 3.80% 6489498
chr7 5594428 3.51% 5594421
chr8 4709132 3.24% 4709128
chr9 4690449 3.39% 4690446
chr10 5276713 3.94% 5276711
chr11 5524289 4.09% 5524286
chr12 5403601 4.05% 5403600
chr13 2583398 2.26% 2583395
chr14 3601918 3.36% 3601916
chr15 3535216 3.47% 3535215
chr16 3848577 4.26% 3848574
chr17 4959426 5.96% 4959422
chr18 2437297 3.03% 2437296
chr19 4169607 7.11% 4169601
chr20 2951257 4.58% 2951254
chr21 1150750 2.46% 1150750
chr22 2464530 4.85% 2464527
chrX 3095698 1.98% 3095696
chrY 97462 0.17% 96101
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 109833747 1 1322 1 1
global segment-length histogram

Files

Filename Size md5
Liver_c6__mean_pred_corrected.bw 835.26 MB 70b432c36bd1e768c071abb608661515
genomic_resource.yaml 1.27 KB 1123d3efac6d64be4887c5769084a6da
statistics/