Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c6/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Liver for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c6
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c6_obs_pval_signal float

liu2026Multiomics_Liver_c6_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Liver_c6_obs_pval_signal [0, 2.69e+03]
n
3,087,297,736
mean
0.678
sd
10.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308729773696.20% 63887022
chr1 248946456 >99.99% 6088340
chr2 242183501 >99.99% 4966753
chr3 198232693 99.97% 4260926
chr4 190204548 99.99% 3093243
chr5 181476362 99.97% 3340548
chr6 170744249 99.96% 3651654
chr7 159335901 99.99% 3292438
chr8 145075850 99.96% 2793762
chr9 138315907 99.94% 2775253
chr10 133787440 99.99% 2953414
chr11 135076642 99.99% 3290168
chr12 133264887 99.99% 3091658
chr13 114354206 99.99% 1578026
chr14 106883664 99.85% 2131028
chr15 101981125 99.99% 1930375
chr16 90225732 99.88% 2304357
chr17 83247290 99.99% 2847615
chr18 80263246 99.86% 1351921
chr19 58607600 99.98% 2603636
chr20 64333817 99.83% 1622980
chr21 46699959 99.98% 710957
chr22 50808459 99.98% 1438400
chrX 156030837 99.99% 1727748
chrY 57217365 99.98% 41822
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 63887022 1 30005634 48.32 9
global segment-length histogram

Files

Filename Size md5
Liver_c6__obs_pval_signal.bw 377.42 MB c4ade7bec4a4bc320185b3535fea0bee
genomic_resource.yaml 1.23 KB c2e90b47082a06e1c67672a1249bd098
statistics/