Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c8/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Liver for cell cluster c8
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c8
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c8_mean_pred_corrected float

liu2026Multiomics_Liver_c8_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Liver_c8_mean_pred_corrected [0.00149, 33.2]
n
79,636,497
mean
0.182
sd
0.517

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 796364972.48% 79635549
chr1 8099237 3.25% 8099235
chr2 6101063 2.52% 6101057
chr3 5178196 2.61% 5178196
chr4 3374018 1.77% 3374016
chr5 4051150 2.23% 4051149
chr6 4764452 2.79% 4764450
chr7 3972125 2.49% 3972125
chr8 3335412 2.30% 3335410
chr9 3387062 2.45% 3387060
chr10 3716072 2.78% 3716071
chr11 4089305 3.03% 4089304
chr12 3879120 2.91% 3879118
chr13 1814267 1.59% 1814267
chr14 2574747 2.41% 2574746
chr15 2529835 2.48% 2529831
chr16 2892532 3.20% 2892532
chr17 3786093 4.55% 3786091
chr18 1683162 2.09% 1683162
chr19 3375262 5.76% 3375262
chr20 2164799 3.36% 2164799
chr21 825207 1.77% 825207
chr22 1854164 3.65% 1854164
chrX 2110670 1.35% 2110670
chrY 78547 0.14% 77627
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 79635549 1 729 1 1
global segment-length histogram

Files

Filename Size md5
Liver_c8__mean_pred_corrected.bw 606.1 MB 7a2cb195c6e2cb7540fbc8cdd868cc85
genomic_resource.yaml 1.27 KB 0eb34a6c43ab01f83562f0041be5f083
statistics/