Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c9/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Liver for cell cluster c9 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Liver_c9_mean_counts_contribs | float |
liu2026Multiomics_Liver_c9_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0695, 0.335] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 197166387 | 6.14% | 195798184 |
| chr1 | 19154714 | 7.69% | 19022150 |
| chr2 | 15326647 | 6.33% | 15218810 |
| chr3 | 12836758 | 6.47% | 12745293 |
| chr4 | 8931219 | 4.70% | 8863931 |
| chr5 | 10611771 | 5.85% | 10537138 |
| chr6 | 11831984 | 6.93% | 11748049 |
| chr7 | 10062318 | 6.31% | 9992482 |
| chr8 | 8923249 | 6.15% | 8860068 |
| chr9 | 8426820 | 6.09% | 8369158 |
| chr10 | 9938254 | 7.43% | 9868968 |
| chr11 | 10138363 | 7.51% | 10070492 |
| chr12 | 9497010 | 7.13% | 9430904 |
| chr13 | 4848576 | 4.24% | 4813499 |
| chr14 | 6234726 | 5.82% | 6191490 |
| chr15 | 6550443 | 6.42% | 6504926 |
| chr16 | 6850195 | 7.58% | 6806417 |
| chr17 | 8950480 | 10.75% | 8892377 |
| chr18 | 4457738 | 5.55% | 4423804 |
| chr19 | 7188492 | 12.26% | 7145250 |
| chr20 | 5267048 | 8.17% | 5231807 |
| chr21 | 2162923 | 4.63% | 2147266 |
| chr22 | 4188572 | 8.24% | 4162296 |
| chrX | 4641926 | 2.97% | 4609398 |
| chrY | 146161 | 0.26% | 142211 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 195798184 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Liver_c9__mean_counts_contribs.bw | 1.18 GB | d13ca82731d47540abe97fd62e3ebd3b |
| genomic_resource.yaml | 1.31 KB | 92d00d2736337fb6301016acb8e7b884 |
| statistics/ |
