Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c9/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Liver for cell cluster c9
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c9
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c9_mean_pred_corrected float

liu2026Multiomics_Liver_c9_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Liver_c9_mean_pred_corrected [0.0018, 30.6]
n
103,434,470
mean
0.174
sd
0.481

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1034344703.22% 103433494
chr1 10062690 4.04% 10062687
chr2 8016201 3.31% 8016198
chr3 6706961 3.38% 6706956
chr4 4645949 2.44% 4645948
chr5 5545576 3.05% 5545575
chr6 6213885 3.64% 6213881
chr7 5260605 3.30% 5260601
chr8 4644743 3.20% 4644741
chr9 4421086 3.19% 4421084
chr10 5209074 3.89% 5209074
chr11 5343007 3.96% 5343001
chr12 4983977 3.74% 4983973
chr13 2525039 2.21% 2525038
chr14 3268748 3.05% 3268748
chr15 3431473 3.36% 3431471
chr16 3607855 3.99% 3607853
chr17 4754770 5.71% 4754767
chr18 2313722 2.88% 2313720
chr19 3871275 6.60% 3871274
chr20 2749589 4.27% 2749589
chr21 1136466 2.43% 1136464
chr22 2207302 4.34% 2207302
chrX 2436469 1.56% 2436469
chrY 78008 0.14% 77080
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 103433494 1 911 1 1
global segment-length histogram

Files

Filename Size md5
Liver_c9__mean_pred_corrected.bw 785.81 MB ea9c1f33fcb22e818c903088629f141c
genomic_resource.yaml 1.27 KB d70118a2025341678b903c9fb2978baa
statistics/