Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Liver/c9/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Liver for cell cluster c9
Description
Labels
  • assay: SHARE-seq
  • cluster: Liver_c9
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Liver
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Liver_c9_obs_pval_signal float

liu2026Multiomics_Liver_c9_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Liver_c9_obs_pval_signal [0, 2.63e+03]
n
3,087,199,872
mean
0.429
sd
5.19

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308719987296.20% 44843121
chr1 248946474 >99.99% 4299375
chr2 242183501 >99.99% 3443212
chr3 198220320 99.96% 2869220
chr4 190203764 99.99% 2041690
chr5 181473734 99.96% 2348787
chr6 170744198 99.96% 2558558
chr7 159335945 99.99% 2272087
chr8 145075959 99.96% 1954580
chr9 138233940 99.88% 1968363
chr10 133787439 99.99% 2178200
chr11 135076543 99.99% 2401500
chr12 133265010 99.99% 2191316
chr13 114354193 99.99% 1067181
chr14 106883605 99.85% 1474567
chr15 101981162 99.99% 1397290
chr16 90226234 99.88% 1661041
chr17 83247366 99.99% 2185804
chr18 80263248 99.86% 921602
chr19 58607600 99.98% 2011232
chr20 64333135 99.83% 1170082
chr21 46699922 99.98% 516287
chr22 50808458 99.98% 1045717
chrX 156030832 99.99% 846529
chrY 57217290 99.98% 18901
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44843121 1 30002648 68.84 10
global segment-length histogram

Files

Filename Size md5
Liver_c9__obs_pval_signal.bw 265.64 MB 21cf5722e4a2b423cdfbf65ac2bd09c7
genomic_resource.yaml 1.23 KB fbe12399bf6ced46dfe97ee533765ea8
statistics/