Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c0/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Lung for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c0
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c0_mean_counts_contribs float

liu2026Multiomics_Lung_c0_mean_counts_contribs
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
 HISTOGRAM FOR liu2026Multiomics_Lung_c0_mean_counts_contribs [-0.0801, 0.35]
n
343,617,873
mean
0.000329
sd
0.00434

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 34361787310.71% 341735193
chr1 31111247 12.50% 30943674
chr2 28834783 11.91% 28675877
chr3 23134373 11.67% 23006183
chr4 17801482 9.36% 17698432
chr5 19351355 10.66% 19243423
chr6 20849847 12.21% 20735488
chr7 18126896 11.38% 18025650
chr8 15588612 10.74% 15502398
chr9 14943487 10.80% 14862433
chr10 17266880 12.91% 17172583
chr11 17669804 13.08% 17576096
chr12 16354799 12.27% 16264725
chr13 9854504 8.62% 9798328
chr14 10879167 10.16% 10820873
chr15 10767716 10.56% 10709624
chr16 10627929 11.76% 10572541
chr17 13737773 16.50% 13665857
chr18 8325403 10.36% 8278175
chr19 9714592 16.57% 9665352
chr20 8650775 13.42% 8603795
chr21 4227726 9.05% 4204747
chr22 6404284 12.60% 6371808
chrX 9117904 5.84% 9065597
chrY 276535 0.48% 271534
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 341735193 1 2114 1.01 1
global segment-length histogram

Files

Filename Size md5
Lung_c0__mean_counts_contribs.bw 2.07 GB 0facba7b847a9a3eedd0b5b50d7167d1
genomic_resource.yaml 1.3 KB fcddf5801d627139ef07be8cd53db91c
statistics/