Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c0/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c0
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c0_mean_pred_corrected float

liu2026Multiomics_Lung_c0_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c0_mean_pred_corrected [0.003, 370]
n
191,145,988
mean
1.39
sd
4.35

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1911459885.96% 191144487
chr1 17421728 7.00% 17421709
chr2 15984975 6.60% 15984948
chr3 12790902 6.45% 12790886
chr4 9768855 5.14% 9768837
chr5 10635075 5.86% 10635059
chr6 11617973 6.80% 11617959
chr7 10026029 6.29% 10026022
chr8 8568598 5.90% 8568585
chr9 8321316 6.01% 8321304
chr10 9604194 7.18% 9604180
chr11 9892370 7.32% 9892359
chr12 9094924 6.82% 9094911
chr13 5409729 4.73% 5409720
chr14 6087290 5.69% 6087280
chr15 6014477 5.90% 6014469
chr16 5963045 6.60% 5963035
chr17 7830633 9.41% 7830623
chr18 4600951 5.72% 4600943
chr19 5582463 9.52% 5582454
chr20 4811341 7.47% 4811330
chr21 2365018 5.06% 2365016
chr22 3624400 7.13% 3624398
chrX 4978997 3.19% 4978988
chrY 150705 0.26% 149472
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 191144487 1 915 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c0__mean_pred_corrected.bw 1.41 GB 3f0717848f994f9b83eb37d796d9340e
genomic_resource.yaml 1.27 KB 7901f4ceda8541a6c2a813adbc316992
statistics/