Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c1/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c1
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c1_mean_pred_corrected float

liu2026Multiomics_Lung_c1_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c1_mean_pred_corrected [0.000742, 339]
n
192,465,295
mean
1.47
sd
4.51

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1924652956.00% 192463754
chr1 17315072 6.96% 17315065
chr2 16125663 6.66% 16125649
chr3 12825069 6.47% 12825053
chr4 9671609 5.08% 9671597
chr5 10888400 6.00% 10888387
chr6 11729558 6.87% 11729539
chr7 10159464 6.38% 10159452
chr8 8909687 6.14% 8909678
chr9 8313791 6.01% 8313779
chr10 9822307 7.34% 9822298
chr11 9870463 7.31% 9870459
chr12 9191999 6.90% 9191988
chr13 5483711 4.79% 5483704
chr14 5911415 5.52% 5911410
chr15 6054750 5.94% 6054745
chr16 6166081 6.83% 6166071
chr17 7925512 9.52% 7925504
chr18 4705192 5.85% 4705188
chr19 5654084 9.65% 5654078
chr20 5041208 7.82% 5041202
chr21 2378765 5.09% 2378762
chr22 3667790 7.22% 3667787
chrX 4559436 2.92% 4559432
chrY 94269 0.16% 92927
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 192463754 1 546 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c1__mean_pred_corrected.bw 1.42 GB aae9c2c1d48910730340e73a7e7a14b2
genomic_resource.yaml 1.27 KB f226d9d947ed5c91bb7c8bbbcdd480b0
statistics/