Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c10/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c10
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c10
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c10_mean_pred_corrected float

liu2026Multiomics_Lung_c10_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c10_mean_pred_corrected [0.000476, 34.6]
n
103,587,906
mean
0.236
sd
0.488

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1035879063.23% 103587844
chr1 9820787 3.94% 9820781
chr2 8363594 3.45% 8363591
chr3 6585284 3.32% 6585280
chr4 4961853 2.61% 4961849
chr5 5430533 2.99% 5430529
chr6 6192169 3.63% 6192160
chr7 5376412 3.37% 5376405
chr8 4487979 3.09% 4487979
chr9 4457715 3.22% 4457714
chr10 4956414 3.70% 4956413
chr11 5472762 4.05% 5472760
chr12 4901737 3.68% 4901729
chr13 2669742 2.33% 2669742
chr14 3387253 3.16% 3387251
chr15 3378931 3.31% 3378930
chr16 3500098 3.87% 3500095
chr17 4669529 5.61% 4669526
chr18 2251169 2.80% 2251168
chr19 3892324 6.64% 3892321
chr20 2731216 4.24% 2731216
chr21 1249136 2.67% 1249136
chr22 2168545 4.27% 2168545
chrX 2600597 1.67% 2600597
chrY 82127 0.14% 82127
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 103587844 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c10__mean_pred_corrected.bw 785.73 MB 54935252fc06861499891079a452ee64
genomic_resource.yaml 1.27 KB 2fac58fee8226963dc2f25af3945f6f8
statistics/