Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c11/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Lung for cell cluster c11 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Lung_c11_mean_counts_contribs | float |
liu2026Multiomics_Lung_c11_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0646, 0.189] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 226093972 | 7.04% | 224586167 |
| chr1 | 20884425 | 8.39% | 20745768 |
| chr2 | 18686906 | 7.72% | 18559818 |
| chr3 | 14725395 | 7.43% | 14623719 |
| chr4 | 10878273 | 5.72% | 10800339 |
| chr5 | 12422454 | 6.84% | 12337302 |
| chr6 | 13618207 | 7.97% | 13526126 |
| chr7 | 11775886 | 7.39% | 11695956 |
| chr8 | 10374317 | 7.15% | 10303615 |
| chr9 | 9756826 | 7.05% | 9692534 |
| chr10 | 11400299 | 8.52% | 11324889 |
| chr11 | 11870784 | 8.79% | 11793867 |
| chr12 | 10953737 | 8.22% | 10880394 |
| chr13 | 6073879 | 5.31% | 6031319 |
| chr14 | 7015829 | 6.55% | 6969224 |
| chr15 | 7233422 | 7.09% | 7185500 |
| chr16 | 7624874 | 8.44% | 7577545 |
| chr17 | 9738936 | 11.70% | 9678594 |
| chr18 | 5108543 | 6.36% | 5073503 |
| chr19 | 7398138 | 12.62% | 7354745 |
| chr20 | 5987351 | 9.29% | 5948615 |
| chr21 | 2761432 | 5.91% | 2742538 |
| chr22 | 4529523 | 8.91% | 4502011 |
| chrX | 5215162 | 3.34% | 5180082 |
| chrY | 59374 | 0.10% | 58164 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 224586167 | 1 | 923 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Lung_c11__mean_counts_contribs.bw | 1.36 GB | 9b819bf9a6b577195e39b553ee01db12 |
| genomic_resource.yaml | 1.31 KB | f83c50856e0fcb2cff9352b4348ee974 |
| statistics/ |
