Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c12/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Lung for cell cluster c12 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Lung_c12_mean_counts_contribs | float |
liu2026Multiomics_Lung_c12_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0603, 0.168] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 203743993 | 6.35% | 202317785 |
| chr1 | 18985965 | 7.63% | 18854367 |
| chr2 | 16521258 | 6.82% | 16403819 |
| chr3 | 13327309 | 6.72% | 13232078 |
| chr4 | 9416526 | 4.95% | 9346438 |
| chr5 | 10977583 | 6.05% | 10898970 |
| chr6 | 12292495 | 7.20% | 12205641 |
| chr7 | 10548646 | 6.62% | 10473982 |
| chr8 | 8961115 | 6.17% | 8897465 |
| chr9 | 8809878 | 6.37% | 8749038 |
| chr10 | 10190671 | 7.62% | 10120152 |
| chr11 | 10754059 | 7.96% | 10680250 |
| chr12 | 9872576 | 7.41% | 9803012 |
| chr13 | 5135385 | 4.49% | 5098123 |
| chr14 | 6444280 | 6.02% | 6399716 |
| chr15 | 6601483 | 6.47% | 6554869 |
| chr16 | 6908129 | 7.65% | 6861706 |
| chr17 | 9415222 | 11.31% | 9352296 |
| chr18 | 4367621 | 5.43% | 4334568 |
| chr19 | 7473076 | 12.75% | 7426133 |
| chr20 | 5439263 | 8.44% | 5402294 |
| chr21 | 2457326 | 5.26% | 2439825 |
| chr22 | 4143455 | 8.15% | 4116281 |
| chrX | 4641965 | 2.97% | 4609286 |
| chrY | 58707 | 0.10% | 57476 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 202317785 | 1 | 955 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Lung_c12__mean_counts_contribs.bw | 1.22 GB | c4962ed9c1207a2ef6f8079dfe549b65 |
| genomic_resource.yaml | 1.31 KB | 2bf0317b20aa97cf234b94ec9cea0bf6 |
| statistics/ |
