Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c12/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c12
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c12
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c12_mean_pred_corrected float

liu2026Multiomics_Lung_c12_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c12_mean_pred_corrected [0.00176, 37.8]
n
108,287,698
mean
0.22
sd
0.544

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1082876983.37% 108287654
chr1 10143675 4.07% 10143668
chr2 8727902 3.60% 8727897
chr3 7057421 3.56% 7057419
chr4 4953459 2.60% 4953458
chr5 5779938 3.18% 5779937
chr6 6534555 3.83% 6534549
chr7 5568515 3.49% 5568511
chr8 4729107 3.26% 4729105
chr9 4672557 3.38% 4672557
chr10 5408189 4.04% 5408186
chr11 5736124 4.25% 5736120
chr12 5262403 3.95% 5262402
chr13 2701842 2.36% 2701842
chr14 3435342 3.21% 3435342
chr15 3504717 3.44% 3504716
chr16 3684754 4.08% 3684753
chr17 5092944 6.12% 5092942
chr18 2296767 2.86% 2296767
chr19 4103759 7.00% 4103757
chr20 2874817 4.46% 2874817
chr21 1310168 2.80% 1310168
chr22 2211587 4.35% 2211587
chrX 2464071 1.58% 2464069
chrY 33085 0.06% 33085
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 108287654 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c12__mean_pred_corrected.bw 820.47 MB 808e0c10f46530b18d184a70b211c18c
genomic_resource.yaml 1.27 KB 0c1f24d1f12258ec9c09ad43dd2dca67
statistics/