Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c13/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Lung for cell cluster c13 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Lung_c13_mean_counts_contribs | float |
liu2026Multiomics_Lung_c13_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.063, 0.155] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 115485673 | 3.60% | 114648793 |
| chr1 | 11296919 | 4.54% | 11215150 |
| chr2 | 9031231 | 3.73% | 8964684 |
| chr3 | 6885549 | 3.47% | 6834451 |
| chr4 | 4734519 | 2.49% | 4697699 |
| chr5 | 6026343 | 3.32% | 5981870 |
| chr6 | 6434979 | 3.77% | 6387772 |
| chr7 | 5577487 | 3.50% | 5536500 |
| chr8 | 4831373 | 3.33% | 4795705 |
| chr9 | 5131035 | 3.71% | 5094481 |
| chr10 | 5638852 | 4.21% | 5597635 |
| chr11 | 6460195 | 4.78% | 6414552 |
| chr12 | 5557941 | 4.17% | 5517517 |
| chr13 | 2593703 | 2.27% | 2574225 |
| chr14 | 3599182 | 3.36% | 3573459 |
| chr15 | 3921469 | 3.84% | 3892598 |
| chr16 | 4320991 | 4.78% | 4291673 |
| chr17 | 6007891 | 7.22% | 5965639 |
| chr18 | 2341640 | 2.91% | 2324166 |
| chr19 | 5292750 | 9.03% | 5257682 |
| chr20 | 3304531 | 5.13% | 3281068 |
| chr21 | 1346848 | 2.88% | 1336689 |
| chr22 | 2588128 | 5.09% | 2570374 |
| chrX | 2503978 | 1.60% | 2485427 |
| chrY | 58139 | 0.10% | 57777 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 114648793 | 1 | 898 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Lung_c13__mean_counts_contribs.bw | 710.59 MB | d348e21d119a259adf345402f5bcb2b9 |
| genomic_resource.yaml | 1.31 KB | 113651f9b8646c96d3bd314c78fbe5ba |
| statistics/ |
