Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c13/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c13
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c13_mean_pred_corrected float

liu2026Multiomics_Lung_c13_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c13_mean_pred_corrected [0.00199, 9.72]
n
61,154,516
mean
0.126
sd
0.21

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 611545161.91% 61154500
chr1 6008355 2.41% 6008355
chr2 4763234 1.97% 4763233
chr3 3622957 1.83% 3622956
chr4 2494336 1.31% 2494336
chr5 3170748 1.75% 3170747
chr6 3422532 2.00% 3422531
chr7 2933282 1.84% 2933282
chr8 2539209 1.75% 2539208
chr9 2718772 1.96% 2718770
chr10 2964357 2.22% 2964356
chr11 3433475 2.54% 3433473
chr12 2944177 2.21% 2944177
chr13 1364865 1.19% 1364864
chr14 1917520 1.79% 1917518
chr15 2066634 2.03% 2066634
chr16 2300967 2.55% 2300967
chr17 3208715 3.85% 3208714
chr18 1227173 1.53% 1227173
chr19 2879815 4.91% 2879815
chr20 1735289 2.69% 1735288
chr21 711288 1.52% 711288
chr22 1356446 2.67% 1356446
chrX 1337740 0.86% 1337739
chrY 32630 0.06% 32630
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 61154500 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c13__mean_pred_corrected.bw 463.89 MB 939a740d6b8db919a09a3d002eb9f582
genomic_resource.yaml 1.27 KB aee9fcb4664e9de549460d0436f30d3b
statistics/