Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c13/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Lung for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c13
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c13_obs_pval_signal float

liu2026Multiomics_Lung_c13_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Lung_c13_obs_pval_signal [0, 654]
n
3,087,058,354
mean
0.498
sd
1.79

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308705835496.19% 37704221
chr1 248946271 >99.99% 3482628
chr2 242183290 >99.99% 3008642
chr3 198220291 99.96% 2337962
chr4 190203830 99.99% 1760344
chr5 181358417 99.90% 2014863
chr6 170739755 99.96% 2078673
chr7 159335901 99.99% 1951822
chr8 145078183 99.96% 1627852
chr9 138220952 99.87% 1684708
chr10 133787433 99.99% 1821007
chr11 135076616 99.99% 2058089
chr12 133264955 99.99% 1783716
chr13 114354022 99.99% 945690
chr14 106883603 99.85% 1192208
chr15 101981143 99.99% 1146909
chr16 90215397 99.86% 1454058
chr17 83247265 99.99% 1795815
chr18 80263240 99.86% 824698
chr19 58607600 99.98% 1676802
chr20 64333754 99.83% 1016111
chr21 46699972 99.98% 449445
chr22 50808344 99.98% 823497
chrX 156030832 99.99% 735587
chrY 57217288 99.98% 33095
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 37704221 1 30011387 81.88 22
global segment-length histogram

Files

Filename Size md5
Lung_c13__obs_pval_signal.bw 219.82 MB 53a5cf81e06382f1d9ecb708d5f384f1
genomic_resource.yaml 1.23 KB 7eb489e3cd1698373f810dcc36007108
statistics/