Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c14/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Lung for cell cluster c14 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Lung_c14_mean_counts_contribs | float |
liu2026Multiomics_Lung_c14_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0583, 0.206] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 209201309 | 6.52% | 207704817 |
| chr1 | 19364720 | 7.78% | 19227319 |
| chr2 | 17239176 | 7.12% | 17113674 |
| chr3 | 13540581 | 6.83% | 13441238 |
| chr4 | 9962415 | 5.24% | 9885653 |
| chr5 | 11231794 | 6.19% | 11149079 |
| chr6 | 12514848 | 7.33% | 12423690 |
| chr7 | 11092861 | 6.96% | 11012525 |
| chr8 | 9460455 | 6.52% | 9391491 |
| chr9 | 9036180 | 6.53% | 8972579 |
| chr10 | 10447251 | 7.81% | 10371996 |
| chr11 | 10987160 | 8.13% | 10910808 |
| chr12 | 9972319 | 7.48% | 9900363 |
| chr13 | 5700579 | 4.98% | 5658110 |
| chr14 | 6471605 | 6.05% | 6425721 |
| chr15 | 6703630 | 6.57% | 6656243 |
| chr16 | 7099776 | 7.86% | 7052178 |
| chr17 | 9071713 | 10.90% | 9011408 |
| chr18 | 4805777 | 5.98% | 4768884 |
| chr19 | 7179082 | 12.25% | 7133448 |
| chr20 | 5666844 | 8.79% | 5627631 |
| chr21 | 2513572 | 5.38% | 2495183 |
| chr22 | 4275283 | 8.41% | 4247338 |
| chrX | 4795666 | 3.07% | 4761496 |
| chrY | 68022 | 0.12% | 66762 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 207704817 | 1 | 995 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Lung_c14__mean_counts_contribs.bw | 1.26 GB | 91d6e0152cb65215d6a04504b4b22e07 |
| genomic_resource.yaml | 1.31 KB | 14c502b2e30fddc821a9ab9d64d2b18a |
| statistics/ |
