Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c14/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c14
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c14
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c14_mean_pred_corrected float

liu2026Multiomics_Lung_c14_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c14_mean_pred_corrected [0.0019, 41.9]
n
110,771,384
mean
0.227
sd
0.55

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1107713843.45% 110771340
chr1 10317029 4.14% 10317023
chr2 9070266 3.75% 9070261
chr3 7120861 3.59% 7120860
chr4 5226881 2.75% 5226881
chr5 5896334 3.25% 5896330
chr6 6606766 3.87% 6606764
chr7 5835904 3.66% 5835901
chr8 4967314 3.42% 4967312
chr9 4776582 3.45% 4776582
chr10 5497056 4.11% 5497054
chr11 5860782 4.34% 5860775
chr12 5287448 3.97% 5287447
chr13 2979734 2.61% 2979733
chr14 3447269 3.22% 3447269
chr15 3556954 3.49% 3556951
chr16 3785323 4.19% 3785321
chr17 4909496 5.90% 4909496
chr18 2514600 3.13% 2514600
chr19 3937120 6.72% 3937120
chr20 2980293 4.62% 2980292
chr21 1330178 2.85% 1330178
chr22 2279582 4.49% 2279580
chrX 2547751 1.63% 2547749
chrY 39861 0.07% 39861
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 110771340 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c14__mean_pred_corrected.bw 839.01 MB 27f606e7d300f0b31a7dfc52856e1204
genomic_resource.yaml 1.27 KB 196c5f47151f3d4105ed7cd58d15bde0
statistics/