Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c15/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Lung for cell cluster c15 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Lung_c15_mean_counts_contribs | float |
liu2026Multiomics_Lung_c15_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0539, 0.228] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 191249605 | 5.96% | 189935273 |
| chr1 | 17945183 | 7.21% | 17823665 |
| chr2 | 15619426 | 6.45% | 15509898 |
| chr3 | 12514288 | 6.31% | 12425953 |
| chr4 | 9115533 | 4.79% | 9048151 |
| chr5 | 10169233 | 5.60% | 10097718 |
| chr6 | 11457400 | 6.71% | 11376920 |
| chr7 | 9831486 | 6.17% | 9762396 |
| chr8 | 8549591 | 5.89% | 8489732 |
| chr9 | 8308518 | 6.00% | 8251433 |
| chr10 | 9503566 | 7.10% | 9437802 |
| chr11 | 10141219 | 7.51% | 10073047 |
| chr12 | 9033144 | 6.78% | 8970601 |
| chr13 | 4893347 | 4.28% | 4858224 |
| chr14 | 6102890 | 5.70% | 6061016 |
| chr15 | 6154890 | 6.03% | 6113194 |
| chr16 | 6595449 | 7.30% | 6552934 |
| chr17 | 8498912 | 10.21% | 8444034 |
| chr18 | 4240441 | 5.28% | 4210908 |
| chr19 | 6802449 | 11.60% | 6761569 |
| chr20 | 5051839 | 7.84% | 5018219 |
| chr21 | 2330490 | 4.99% | 2314059 |
| chr22 | 3900214 | 7.67% | 3875417 |
| chrX | 4401133 | 2.82% | 4370785 |
| chrY | 88964 | 0.16% | 87598 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 189935273 | 1 | 986 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Lung_c15__mean_counts_contribs.bw | 1.15 GB | cfdcaf51568bf84224a39fd9e3f64e23 |
| genomic_resource.yaml | 1.31 KB | 274945932c2abf1b5ccbdfd69d87b2b8 |
| statistics/ |
