Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c15/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c15
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c15
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c15_mean_pred_corrected float

liu2026Multiomics_Lung_c15_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c15_mean_pred_corrected [0.00102, 24.4]
n
100,968,516
mean
0.16
sd
0.37

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1009685163.15% 100968478
chr1 9529794 3.83% 9529790
chr2 8197773 3.38% 8197773
chr3 6577481 3.32% 6577481
chr4 4757026 2.50% 4757022
chr5 5329090 2.94% 5329086
chr6 6047613 3.54% 6047612
chr7 5151549 3.23% 5151546
chr8 4472833 3.08% 4472829
chr9 4389289 3.17% 4389288
chr10 4999756 3.74% 4999752
chr11 5379982 3.98% 5379980
chr12 4766877 3.58% 4766875
chr13 2559111 2.24% 2559111
chr14 3229137 3.02% 3229137
chr15 3258222 3.19% 3258221
chr16 3502759 3.88% 3502758
chr17 4566902 5.49% 4566901
chr18 2220156 2.76% 2220156
chr19 3711979 6.33% 3711979
chr20 2656542 4.12% 2656540
chr21 1224159 2.62% 1224159
chr22 2070775 4.07% 2070773
chrX 2317976 1.49% 2317974
chrY 51735 0.09% 51735
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 100968478 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c15__mean_pred_corrected.bw 766.21 MB d521728c4f6001a02737bbf347cef17a
genomic_resource.yaml 1.27 KB 3627e4eb63b416267576cbb0cd32ac0a
statistics/