Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c16/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Lung for cell cluster c16 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Lung_c16_mean_counts_contribs | float |
liu2026Multiomics_Lung_c16_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0302, 0.0897] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 109853935 | 3.42% | 108795638 |
| chr1 | 10505497 | 4.22% | 10404729 |
| chr2 | 8792981 | 3.63% | 8706001 |
| chr3 | 7047981 | 3.55% | 6977969 |
| chr4 | 5097823 | 2.68% | 5046124 |
| chr5 | 5754798 | 3.17% | 5697942 |
| chr6 | 6502524 | 3.81% | 6439126 |
| chr7 | 5670225 | 3.56% | 5615055 |
| chr8 | 4763919 | 3.28% | 4716966 |
| chr9 | 4653775 | 3.36% | 4609664 |
| chr10 | 5292570 | 3.96% | 5241252 |
| chr11 | 5874319 | 4.35% | 5818340 |
| chr12 | 5263453 | 3.95% | 5212167 |
| chr13 | 2760716 | 2.41% | 2732968 |
| chr14 | 3411206 | 3.19% | 3378619 |
| chr15 | 3581529 | 3.51% | 3547543 |
| chr16 | 3874236 | 4.29% | 3838772 |
| chr17 | 5086151 | 6.11% | 5040073 |
| chr18 | 2327584 | 2.90% | 2304332 |
| chr19 | 4532045 | 7.73% | 4493204 |
| chr20 | 2894331 | 4.49% | 2866833 |
| chr21 | 1269356 | 2.72% | 1256653 |
| chr22 | 2272036 | 4.47% | 2251303 |
| chrX | 2578495 | 1.65% | 2554012 |
| chrY | 46385 | 0.08% | 45991 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 108795638 | 1 | 716 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Lung_c16__mean_counts_contribs.bw | 674.56 MB | 62db16551fa46e4bf20f8c025c34cbe9 |
| genomic_resource.yaml | 1.31 KB | 9f2ee7d54398cc3e75942f99b36bb988 |
| statistics/ |
