Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c16/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c16
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c16
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c16_mean_pred_corrected float

liu2026Multiomics_Lung_c16_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Lung_c16_mean_pred_corrected [0.0006, 5.17]
n
55,471,366
mean
0.047
sd
0.0897

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 554713661.73% 55471352
chr1 5316637 2.14% 5316635
chr2 4416782 1.82% 4416781
chr3 3550060 1.79% 3550060
chr4 2555670 1.34% 2555669
chr5 2893659 1.59% 2893658
chr6 3291847 1.93% 3291847
chr7 2843504 1.78% 2843503
chr8 2397641 1.65% 2397640
chr9 2350800 1.70% 2350800
chr10 2660964 1.99% 2660964
chr11 2981064 2.21% 2981063
chr12 2659668 2.00% 2659667
chr13 1380803 1.21% 1380802
chr14 1723815 1.61% 1723815
chr15 1809361 1.77% 1809359
chr16 1962388 2.17% 1962386
chr17 2598675 3.12% 2598675
chr18 1163738 1.45% 1163738
chr19 2349891 4.01% 2349891
chr20 1453882 2.26% 1453882
chr21 642679 1.38% 642679
chr22 1138617 2.24% 1138617
chrX 1304657 0.84% 1304657
chrY 24564 0.04% 24564
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 55471352 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c16__mean_pred_corrected.bw 421.52 MB 79b6d341957c430539311dccaaaf165e
genomic_resource.yaml 1.27 KB 701c1d62ecc234a996186e4c381e3199
statistics/