Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c17/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Lung for cell cluster c17 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Lung_c17_mean_counts_contribs | float |
liu2026Multiomics_Lung_c17_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0274, 0.0779] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 87128922 | 2.71% | 86320535 |
| chr1 | 8400314 | 3.37% | 8322242 |
| chr2 | 6708309 | 2.77% | 6644816 |
| chr3 | 5461503 | 2.75% | 5409578 |
| chr4 | 3796999 | 2.00% | 3759813 |
| chr5 | 4354082 | 2.40% | 4312793 |
| chr6 | 5033845 | 2.95% | 4986328 |
| chr7 | 4462702 | 2.80% | 4420774 |
| chr8 | 3621584 | 2.50% | 3587520 |
| chr9 | 3786741 | 2.74% | 3751668 |
| chr10 | 4229384 | 3.16% | 4189932 |
| chr11 | 4739560 | 3.51% | 4696253 |
| chr12 | 4256101 | 3.19% | 4215926 |
| chr13 | 1993901 | 1.74% | 1974904 |
| chr14 | 2732957 | 2.55% | 2707701 |
| chr15 | 2910597 | 2.85% | 2883640 |
| chr16 | 3260263 | 3.61% | 3231495 |
| chr17 | 4427296 | 5.32% | 4388160 |
| chr18 | 1697332 | 2.11% | 1681080 |
| chr19 | 4029637 | 6.87% | 3996094 |
| chr20 | 2277544 | 3.53% | 2256878 |
| chr21 | 988670 | 2.12% | 978965 |
| chr22 | 1895392 | 3.73% | 1878481 |
| chrX | 2038378 | 1.31% | 2019830 |
| chrY | 25831 | 0.05% | 25664 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 86320535 | 1 | 848 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Lung_c17__mean_counts_contribs.bw | 534.97 MB | a177b4bf068713ce9d4dc257ca7d02f6 |
| genomic_resource.yaml | 1.31 KB | 7a436496296b0c7b2b94f73b7de0e8db |
| statistics/ |
