Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c2/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c2
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c2_mean_pred_corrected float

liu2026Multiomics_Lung_c2_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c2_mean_pred_corrected [0.000803, 242]
n
185,724,523
mean
1.1
sd
3.29

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1857245235.79% 185724276
chr1 16833824 6.76% 16833795
chr2 15535745 6.41% 15535725
chr3 12220422 6.16% 12220402
chr4 9205915 4.84% 9205900
chr5 10274841 5.66% 10274823
chr6 11206782 6.56% 11206772
chr7 9743742 6.11% 9743735
chr8 8457591 5.83% 8457577
chr9 7999053 5.78% 7999038
chr10 9480269 7.09% 9480252
chr11 9638831 7.14% 9638819
chr12 8988317 6.74% 8988309
chr13 5156886 4.51% 5156882
chr14 5730173 5.35% 5730170
chr15 5952566 5.84% 5952561
chr16 6099710 6.75% 6099701
chr17 7804541 9.37% 7804530
chr18 4520610 5.62% 4520605
chr19 5572397 9.51% 5572391
chr20 4905239 7.61% 4905234
chr21 2268359 4.86% 2268356
chr22 3604257 7.09% 3604252
chrX 4456246 2.86% 4456240
chrY 68207 0.12% 68207
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 185724276 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c2__mean_pred_corrected.bw 1.37 GB a4148126142cdde333dd568e137dee48
genomic_resource.yaml 1.27 KB 450e44c22b84d7177b21b271b0156358
statistics/