Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c3/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Lung for cell cluster c3 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Lung_c3_mean_counts_contribs | float |
liu2026Multiomics_Lung_c3_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0748, 0.28] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 337697879 | 10.52% | 335833048 |
| chr1 | 30538990 | 12.27% | 30371778 |
| chr2 | 28236784 | 11.66% | 28080317 |
| chr3 | 22698034 | 11.45% | 22570676 |
| chr4 | 16998053 | 8.94% | 16898909 |
| chr5 | 18709129 | 10.31% | 18604458 |
| chr6 | 20535911 | 12.02% | 20422175 |
| chr7 | 17769307 | 11.15% | 17669696 |
| chr8 | 15599386 | 10.75% | 15512135 |
| chr9 | 14593996 | 10.55% | 14513635 |
| chr10 | 17288448 | 12.92% | 17192508 |
| chr11 | 17335508 | 12.83% | 17242699 |
| chr12 | 15995792 | 12.00% | 15906980 |
| chr13 | 9547207 | 8.35% | 9492874 |
| chr14 | 10486126 | 9.80% | 10429106 |
| chr15 | 10733346 | 10.52% | 10674430 |
| chr16 | 10956382 | 12.13% | 10898540 |
| chr17 | 13798670 | 16.57% | 13725600 |
| chr18 | 8176142 | 10.17% | 8128625 |
| chr19 | 9830245 | 16.77% | 9779872 |
| chr20 | 8781477 | 13.63% | 8734420 |
| chr21 | 4216251 | 9.03% | 4192345 |
| chr22 | 6433036 | 12.66% | 6400034 |
| chrX | 8278032 | 5.31% | 8231328 |
| chrY | 161627 | 0.28% | 159908 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 335833048 | 1 | 985 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Lung_c3__mean_counts_contribs.bw | 2.03 GB | 3e00ca06436678303881b98eeaab0047 |
| genomic_resource.yaml | 1.3 KB | 9450e936c3103e1830cf5656664fc936 |
| statistics/ |
