Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c3/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c3
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c3_mean_pred_corrected float

liu2026Multiomics_Lung_c3_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c3_mean_pred_corrected [0.00109, 244]
n
185,814,329
mean
1.04
sd
3.22

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1858143295.79% 185814077
chr1 16894733 6.79% 16894709
chr2 15473326 6.39% 15473302
chr3 12411337 6.26% 12411328
chr4 9215823 4.84% 9215806
chr5 10191907 5.61% 10191891
chr6 11301653 6.62% 11301640
chr7 9727760 6.10% 9727743
chr8 8490592 5.85% 8490581
chr9 8061543 5.83% 8061533
chr10 9500199 7.10% 9500184
chr11 9586377 7.10% 9586370
chr12 8792127 6.60% 8792112
chr13 5178903 4.53% 5178894
chr14 5798947 5.42% 5798945
chr15 5917786 5.80% 5917780
chr16 6086095 6.74% 6086079
chr17 7785673 9.35% 7785659
chr18 4462857 5.55% 4462852
chr19 5581346 9.52% 5581342
chr20 4835386 7.50% 4835379
chr21 2333949 5.00% 2333945
chr22 3604283 7.09% 3604279
chrX 4491249 2.88% 4491247
chrY 90478 0.16% 90477
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 185814077 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c3__mean_pred_corrected.bw 1.37 GB 038c654e92fedc0412d796d70605900c
genomic_resource.yaml 1.27 KB fe09eef38fd49043648813157d33fdb6
statistics/